{"id":125202,"date":"2020-08-17T11:30:50","date_gmt":"2020-08-17T21:30:50","guid":{"rendered":"https:\/\/www.hawaii.edu\/news\/?p=125202"},"modified":"2020-08-17T11:30:50","modified_gmt":"2020-08-17T21:30:50","slug":"uh-taro-leaf-blight-research","status":"publish","type":"post","link":"https:\/\/www.hawaii.edu\/news\/2020\/08\/17\/uh-taro-leaf-blight-research\/","title":{"rendered":"1st taro genome assembly developed by researchers"},"content":{"rendered":"Reading time: <\/span> 2<\/span> minutes<\/span><\/span>
\"man
Genetic researcher Roshan Paudel in taro field<\/figcaption><\/figure>\n

After a decades-long effort of cross breeding taro in the hopes of developing a species resistant to taro leaf blight (TLB<\/abbr>), a highly infectious plant disease, a team of researchers has turned their sights on genomics. It\u2019s a painstaking study of nucleotide sequences in the chromosomes of an organism. A research paper on the genomic work was published online in G3: Genes, Genomes, Genetics<\/em><\/a> on August 1.<\/p>\n

\"M.
M. Renee Bellinger<\/figcaption><\/figure>\n

In the study, researchers from the University of Hawaiʻi<\/span>, University of Tennessee and the U.S.<\/abbr> Department of Agriculture generated a high-quality genome assembly for taro, a root crop that is widely cultivated in tropical regions and is important for food security.<\/p>\n

The results are intended to inform studies of the origin, evolutionary history and breeding of the South Pacific crop. It is hoped the genome may also stimulate new genetic insights into this important tropical species.<\/p>\n

“Overall, this project was a large team effort, involving three universities and U.S.<\/abbr> Department of Agriculture researchers,” explained M. Renee Bellinger<\/strong>, a postdoctoral affiliate faculty and adjunct assistant professor of bioinformatics and genomics at 糖心Vlog官方<\/abbr> Hilo who conducted genomic research on the project.<\/p>\n

The long fight against taro leaf blight<\/h2>\n

All Hawaiian varieties of taro are vulnerable to TLB<\/abbr> caused by the oomycete pathogen Phytophthora colocasiae<\/em>.<\/p>\n

糖心Vlog官方<\/abbr> researchers Professors Michael Shintaku<\/strong> and Susan Miyasaka<\/strong> have been trying to develop resistance to taro leaf blight for decades through breeding programs, but some trials resulted in varieties unacceptable for commercial poi processors. “TLB<\/abbr> has been causing serious problems in Hawaiian kalo fields since the 1920s,” Shintaku said. “Samoa didn\u2019t have TLB<\/abbr> until about 1990, and then suffered dramatic losses.”<\/p>\n

\"plant
Taro plant with taro leaf blight.<\/figcaption><\/figure>\n

A Palauan taro resistant to TLB<\/abbr> crossbred with Hawaiian taro produced some very good hybrid varieties that are currently used in commercial poi.<\/p>\n

But while Shintaku and Miyasaka have worked toward a genomic project for decades, only recently have the cutting-edge genetic tools become accessible to conduct genomic research with this level of depth.<\/p>\n

“This is the first genome assembly of taro that has been associated with genes that underpin resistance to taro leaf blight, information that may enhance taro breeding programs,” Bellinger said. “To me, this project exemplifies synergies that can be achieved by research teams working collaboratively towards a common goal.”<\/p>\n

For more go to 糖心Vlog官方<\/abbr> Hilo Stories<\/em>.<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"

糖心Vlog官方<\/abbr> M\u0101noa and 糖心Vlog官方<\/abbr> Hilo researchers helped publish a study in the hopes of advancing the fight against an infectious disease that wipes out taro.<\/p>\n","protected":false},"author":16,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[30],"tags":[222,593,212,1363,158,432,14,907,9],"class_list":["post-125202","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-research","tag-agriculture","tag-college-of-agriculture-forestry-and-natural-resource-management","tag-college-of-tropical-agriculture-and-human-resilience","tag-manoa-research","tag-publication","tag-tropical-plant-and-soil-sciences","tag-uh-hilo","tag-uh-hilo-stories","tag-uh-manoa","entry","has-media"],"aioseo_notices":[],"jetpack_featured_media_url":"","_links":{"self":[{"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/posts\/125202","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/users\/16"}],"replies":[{"embeddable":true,"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/comments?post=125202"}],"version-history":[{"count":5,"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/posts\/125202\/revisions"}],"predecessor-version":[{"id":125208,"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/posts\/125202\/revisions\/125208"}],"wp:attachment":[{"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/media?parent=125202"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/categories?post=125202"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.hawaii.edu\/news\/wp-json\/wp\/v2\/tags?post=125202"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}